Journal: eLife

Article Title: Inhibition of the Notch signal transducer CSL by Pkc53E-mediated phosphorylation to fend off parasitic immune challenge in Drosophila

doi: 10.7554/eLife.89582

Figure Lengend Snippet:

Article Snippet: Antibody , Rabbit polyclonal anti-mCherry , GeneTex , RRID: AB_2721247 ; Cat# GTX128508 , WB(1:1000).

Techniques: Recombinant, In Vitro, Expressing, Activation Assay, Control, Transfection, Construct, Activity Assay, Clone Assay, Knock-In, Mutagenesis, Knock-Out, Kinase Assay, Purification, Reporter Assay, Software, Sequencing

Journal: Oncogene

Article Title: Autophagy suppresses Ras-driven epithelial tumourigenesis by limiting the accumulation of reactive oxygen species

doi: 10.1038/onc.2017.175

Figure Lengend Snippet: Ras V12 expression induces autophagy. ( a – d ) Effect of Atg8a RNAi , Ras V12 and Ras V12 Atg8a RNAi expressed via the dpp-GAL4 driver on pmCherry-Atg8a expression in L3 wing discs. mCherry-Atg8a levels ( b ) are increased upon Ras activation. ( c ) mCherry-Atg8a punctae are detected in the Dpp domain (dotted lines) upon expression of Tsc1 and Tsc2 transgenes (positive control) or Ras V12 , while no puncta is detected upon expression of a control lacZ . ( d ) Non-cell-autonomous activation of autophagy is also observed in wild-type tissue surrounding Ras V12 and Ras V12 Atg8a RNAi tissue (arrowheads). ( e ) Monitoring of autophagy flux induction by detection of free mCherry in mCherry-Atg8a tissues. A 27 kDa band corresponding to free mCherry is detected in wing discs expressing Ras V12 and Ras V12 Atg8a RNAi in the Dpp domain, as well as in the positive control expressing Tor TED . *, unspecified band. ( f ) Effect of Atg8a RNAi , Ras V12 and Ras V12 Atg8a RNAi expressed via the dpp-GAL4 driver on GFP-Ref(2)P accumulation in L3 wing discs. Atg8a knockdown in the Dpp domain blocks autophagic flux as seen by accumulation of GFP-Ref(2)P aggregates. Slight accumulation of Ref(2)P aggregates is detected upon Ras activation, and blocking autophagic flux in this context leads to massive accumulation of Ref(2)P aggregates in the Dpp domain, quantified in ( g ). ( h ) As in the developing eye epithelium, autophagy inhibition in a Ras-activated background leads to tissue overgrowth, with proportion of GFP+ tissue higher in Ras V12 Atga- RNAi compared with Ras-only or Atg8a -RNAi-only controls. Scale bars: ( a and e ) 100 μm, ( c ) 20 μm and ( d ) 50 μm. Error bars: s.e.m. Statistics: one-way ANOVA with Tukey's multiple correction.

Article Snippet: Primary antibodies used were as follows: rabbit polyclonal anti-ref(2)p (1:10 000 (WB), 1:2000 (IF); a gift from G Juhász), rabbit polyclonal anti-Atg8a (1:5000 (WB); a gift from T Neufeld), mouse anti-MMP1 (1:100 (WB); Developmental Studies Hybridoma Bank, University of Iowa, IA, USA), mouse monoclonal anti-Elav (1:200; Developmental Studies Hybridoma Bank), rabbit polyclonal anti-β-galactosidase (1:200; Molecular Probes, Eugene, OR, USA), rabbit polyclonal anti-Dcp1 (1:200; Cell Signaling, Danvers, MA, USA; a kind gift of L Cheng), mouse monoclonal anti-activated ERK1/2 (phospho-ERK 1:5000; Sigma, St Louis, MO, USA), rabbit polyclonal anti-ERK1/2 (total-ERK 1:5000; Cell Signaling), mouse monoclonal anti-α-tubulin (1:10 000; Sigma), rabbit polyclonal anti-mCherry (1:6000; Kerafast, Boston, MA, USA; EMU109).

Techniques: Expressing, Activation Assay, Positive Control, Blocking Assay, Inhibition